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Chemical and genomic diversity of six Lonicera species occurring in Korea

Authors
Bin Kang, KyoKang, Shin-JaeKim, Mi SongLee, Dong YoungHan, Sang IlKi, Tae BumPark, Jee YoungKim, JinwoongYang, Tae-JinSung, Sang Hyun
Issue Date
Nov-2018
Publisher
PERGAMON-ELSEVIER SCIENCE LTD
Keywords
Lonicera; Caprifoliaceae; Chemical diversity; Genomic diversity; Chloroplast DNA; Specialized metabolites; LC-MS
Citation
PHYTOCHEMISTRY, v.155, pp.126 - 135
Journal Title
PHYTOCHEMISTRY
Volume
155
Start Page
126
End Page
135
URI
https://scholarworks.sookmyung.ac.kr/handle/2020.sw.sookmyung/4193
DOI
10.1016/j.phytochem.2018.07.012
ISSN
0031-9422
Abstract
Lonicera spp. (Caprifoliaceae) are important not only as a common medicinal herb in East Asia but also as one of the most problematic invasive species in North America. In the present study, we performed a systemic analysis of genomic and chemical diversity among six Lonicera species occurring in Korea, L. japonica, L. maackii, L. insularis, L. sachalinensis, L. praeflorens, and L. vesicaria, using chloroplast DNA whole genome shotgun (WGS) sequencing and LC MS analyses. The phylogenetic and phylochemical relationships did not coincide with each other, but partial consistency could be found among them. InDel-based cDNA marker for authentication was developed based on the genome sequences. Flavonoids, iridoids, and organic acids were identified in the LC MS analyses, and their inter-species distribution and localization were also revealed.
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