Insight into the influence of various cultivation regions on the identification of metabolites from Capsella bursa-pastoris via a clustering algorithm
  • Lee, In Young
  • Lee, Doo-Hee
  • Lee, Min Ju
  • Park, Ju Hong
  • Joo, Nami
Citations

WEB OF SCIENCE

0
Citations

SCOPUS

0

초록

This study focused on the regional differentiation of metabolites of C. bursa-pastoris cultivated across Korea via UHPLC-HRMS-based untargeted metabolomics. Extensive screening was conducted on samples collected from five distinct sites in 20 cities, resulting in the identification of 311 primary and secondary metabolites. The samples were classified via six clustering techniques (K-means, agglomerative clustering, spectral clustering, Birch, mini-batch K-means, and bisecting K-means) via a clustering algorithm that is based on metabolite concentrations. Twenty key features that significantly influenced the clustering were extracted and validated. The classification results demonstrated a strong correlation with the geographical location of the cultivation site. C. bursa-pastoris from inland regions presented relatively high concentrations of sulfureous compounds, such as glucosinolic acid and isothiocyanate. The findings of this study provide valuable insights into the integration of machine learning techniques with untargeted metabolomics, facilitating the development of targeted phytochemical profiles.

키워드

<italic>Capsella bursa-pastoris</italic>Machine learningUHPLC-HRMSClusteringMetabolitesHIPPOPHAE-RHAMNOIDES L.FLAVONOL GLYCOSIDESPROLINESYSTEMSSTRESSFUTURESIZE
제목
Insight into the influence of various cultivation regions on the identification of metabolites from Capsella bursa-pastoris via a clustering algorithm
저자
Lee, In YoungLee, Doo-HeeLee, Min JuPark, Ju HongJoo, Nami
DOI
10.1038/s41598-025-19391-y
발행일
2025-10
유형
Article
저널명
Scientific Reports
15
1