Identification, characterization, and immobilization of a novel YbfF esterase from Halomonas elongata
  • Yoo, Wanki
  • Kim, Booyoung
  • Jeon, Sangeun
  • Kim, Kyeong Kyu
  • Kim, T. Doohun
Citations

WEB OF SCIENCE

11
Citations

SCOPUS

14

초록

The YbfF esterase family, which has a bifurcated binding pocket for diverse ligands, could serve as excellent biocatalysts in industrial and biotechnological applications. Here, the identification, characterization, and immobilization of a novel YbfF esterase (YbfFHalomonas elongata) from Halomonas elongata DSM 2581 is reported. Biochemical characterization of YbfF was carried out using activity staining, chromatographic analysis, kinetic analysis, activity assay, acetic acid release, and pH-indicator-based hydrolysis. YbfFH.elongata displayed broad substrate specificity, including that for p-nitrophenyl esters, glucose pentaacetate, tert-butyl acetate, and β-lactam-containing compounds, with high efficiency. Based on a homology model of YbfFH.elongata, Trp237 in the substrate-binding pocket, a critical residue for catalytic activity and substrate specificity was identified and characterized. Furthermore, crosslinked enzyme aggregates and nanoflower formation were explored to enhance the chemical stability and recyclability of YbfFH.elongata. The present study is the first report of a YbfF esterase from extremophiles, and explains its protein stability, catalytic activity, substrate specificities and diversities, kinetics, functional residues, amyloid formation, and immobilization. © 2020 Elsevier B.V.

키워드

Halomonas elongataImmobilizationSubstrate specificityYbfFHalomonas elongata4 nitrophenyl esteracetic acidacetic acid derivativeester derivativeesteraseglucose pentaacetatetert butylacetateunclassified drugYbfF esteraseArticlebiochemical analysiscatalysischromatographycontrolled studyenzyme analysisenzyme assayenzyme immobilizationenzyme kineticsenzyme specificityHalomonasHalomonas elongatahydrolysismolecular modelmolecular stabilitynonhumanpH measurementprotein cross linkingprotein stabilitysequence analysisstructure analysis
제목
Identification, characterization, and immobilization of a novel YbfF esterase from Halomonas elongata
저자
Yoo, WankiKim, BooyoungJeon, SangeunKim, Kyeong KyuKim, T. Doohun
DOI
10.1016/j.ijbiomac.2020.09.247
발행일
2020-12
유형
Article
저널명
International Journal of Biological Macromolecules
165
페이지
1139 ~ 1148