GxG-Viztool: A program for visualizing gene-gene interactions in genetic association analysis
DC Field | Value | Language |
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dc.contributor.author | Kim K. | - |
dc.contributor.author | Kwon M.-S. | - |
dc.contributor.author | Lee S.Y. | - |
dc.contributor.author | Namkung J. | - |
dc.contributor.author | Li M.D. | - |
dc.contributor.author | Park T. | - |
dc.date.available | 2021-02-22T13:03:38Z | - |
dc.date.issued | 2012-10 | - |
dc.identifier.issn | 0000-0000 | - |
dc.identifier.uri | https://scholarworks.sookmyung.ac.kr/handle/2020.sw.sookmyung/12399 | - |
dc.description.abstract | Gene-gene interactions are important factors underlying a common complex trait that is mostly polygenic. While many methods have been proposed to analyze gene-gene interactions in genetic association studies, the interpretation of the identified gene-gene interactions is not straightforward. In order to aid the interpretation of gene-gene interactions, we developed the GxG-Viztool, an executable program for visualizing gene-gene interactions in genetic association analysis. The GxG-Viztool provides an effective way to recognize genotype combinations that enhance/repress a trait and to display polygenic structure of interactions. The GxG-Viztool implements six graphical tools: checkerboard, pairwise checkerboard, forest, funnel, 3D lattice and parallel coordinate plots, which make it effective to recognize certain patterns in gene-gene interactions. It is freely available at http://bibs. snu. ac. kr/GxG-Viz tool. © 2012 IEEE. | - |
dc.format.extent | 6 | - |
dc.language | 영어 | - |
dc.language.iso | ENG | - |
dc.title | GxG-Viztool: A program for visualizing gene-gene interactions in genetic association analysis | - |
dc.type | Article | - |
dc.identifier.doi | 10.1109/BIBMW.2012.6470249 | - |
dc.identifier.scopusid | 2-s2.0-84875583514 | - |
dc.identifier.bibliographicCitation | Proceedings - 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2012, pp 838 - 843 | - |
dc.citation.title | Proceedings - 2012 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2012 | - |
dc.citation.startPage | 838 | - |
dc.citation.endPage | 843 | - |
dc.type.docType | Conference Paper | - |
dc.description.isOpenAccess | N | - |
dc.description.journalRegisteredClass | scopus | - |
dc.subject.keywordPlus | 3D lattices | - |
dc.subject.keywordPlus | Association analysis | - |
dc.subject.keywordPlus | Complex traits | - |
dc.subject.keywordPlus | Executable programs | - |
dc.subject.keywordPlus | Gene-gene interaction | - |
dc.subject.keywordPlus | Graphical tools | - |
dc.subject.keywordPlus | Parallel coordinate plots | - |
dc.subject.keywordPlus | Association reactions | - |
dc.subject.keywordPlus | Bioinformatics | - |
dc.subject.keywordPlus | Flow visualization | - |
dc.subject.keywordPlus | Pattern recognition | - |
dc.subject.keywordPlus | Genes | - |
dc.subject.keywordAuthor | Gene-gene interaction | - |
dc.subject.keywordAuthor | Genetic association analysis | - |
dc.subject.keywordAuthor | Pattern recognition | - |
dc.subject.keywordAuthor | Visualization | - |
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